PTSDgene database

SNP Report

Basic Info
Name rs6669632 dbSNP Ensembl
Location 1:192818400 - 192818400(+)
Variant Seq C
Ancestral Allele T
Ref Seq T
Minor Allele Frequence 0.252396
Annotation downstream_gene_variant
SIFT Annotation deleterious
SIFT Variant Effect deleterious(ENST00000235382)
PolyPhen Annotation probably_damaging
PolyPhen Variant Effect probably_damaging(ENST00000235382)
rSNP? Yes Link in rVarBase
Related Regulatory Elements n/a
Chromatin State Weak transcription
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 0)

SNPs in LD with rs6669632 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
RP11-259G18.3 No Adipose Subcutaneous cis GTEx