PTSDgene database

SNP Report

Basic Info
Name rs627647 dbSNP Ensembl
Location 11:63443047 - 63443047(+)
Variant Seq G
Ancestral Allele G
Ref Seq A
Minor Allele Frequence 0.34984
Annotation synonymous_variant; intron_variant; NMD_transcript_variant
SIFT Annotation deleterious
SIFT Variant Effect deleterious(ENST00000279178)
PolyPhen Annotation possibly_damaging
PolyPhen Variant Effect possibly_damaging(ENST00000279178)
rSNP? No Link in rVarBase
Related Regulatory Elements n/a
Chromatin State Inactive region
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 0)

SNPs in LD with rs627647 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
LRRC37A4P No Adipose Subcutaneous cis GTEx