PTSDgene database

SNP Report

Basic Info
Name rs62393287 dbSNP Ensembl
Location 5:161057379 - 161057379(+)
Variant Seq G
Ref Seq A
Minor Allele Frequence 0.166134
Annotation upstream_gene_variant
SIFT Annotation tolerated
SIFT Variant Effect tolerated(ENST00000327245)
PolyPhen Annotation benign
PolyPhen Variant Effect benign(ENST00000327245)
rSNP? No Link in rVarBase
Related Regulatory Elements n/a
Chromatin State Inactive region
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 0)

SNPs in LD with rs62393287 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
CRHR1-IT1 Yes Adipose Subcutaneous cis GTEx