PTSDgene database

SNP Report

Basic Info
Name rs58612211 dbSNP Ensembl
Location 4:31288842 - 31288842(+)
Variant Seq G
Ancestral Allele G
Ref Seq T
Minor Allele Frequence 0.21246
Annotation downstream_gene_variant
SIFT Annotation deleterious; tolerated
SIFT Variant Effect deleterious(ENST00000621961); tolerated(ENST00000511884)
PolyPhen Annotation benign
PolyPhen Variant Effect benign(ENST00000511884, ENST00000621961)
rSNP? No Link in rVarBase
Related Regulatory Elements n/a
Chromatin State Inactive region
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 0)

SNPs in LD with rs58612211 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
CRHR1-IT1 Yes Adipose Subcutaneous cis GTEx