PTSDgene database

SNP Report

Basic Info
Name rs4963411 dbSNP Ensembl
Location 11:63412979 - 63412979(+)
Variant Seq G
Ancestral Allele C
Ref Seq C
Minor Allele Frequence 0.466054
Annotation downstream_gene_variant
Variant Effect downstream_gene_variant(ENST00000536333, ENST00000279178)
SIFT Annotation tolerated
SIFT Variant Effect tolerated(ENST00000279178)
PolyPhen Annotation benign
PolyPhen Variant Effect benign(ENST00000279178)
rSNP? Yes Link in rVarBase
Related Regulatory Elements n/a
Chromatin State Weak transcription
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Association Results (Positive/Negative/Trend)
SLC22A9 solute carrier family 22 (organic anion transporter), member 9 11q12.3 Mapped by Literature SNP, Mapped by LD-proxy

SNPs in LD with rs4963411 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
LRRC37A4P No Adipose Subcutaneous cis GTEx