PTSDgene database

SNP Report

Basic Info
Name rs493674 dbSNP Ensembl
Location 4:46212709 - 46212709(+)
Variant Seq C
Ancestral Allele T
Ref Seq T
Minor Allele Frequence 0.499601
Annotation intron_variant
SIFT Annotation deleterious_-_low_confidence
SIFT Variant Effect deleterious_-_low_confidence(ENST00000295452)
PolyPhen Annotation probably_damaging
PolyPhen Variant Effect probably_damaging(ENST00000295452)
rSNP? No Link in rVarBase
Related Regulatory Elements n/a
Chromatin State Inactive region
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 0)

SNPs in LD with rs493674 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
CRHR1-IT1 Yes Adipose Subcutaneous cis GTEx