PTSDgene database

SNP Report

Basic Info
Name rs4705059 dbSNP Ensembl
Location 5:148819436 - 148819436(+)
Variant Seq T
Ancestral Allele T
Ref Seq C
Minor Allele Frequence 0.348043
Annotation upstream_gene_variant
SIFT Annotation deleterious
SIFT Variant Effect deleterious(ENST00000305988)
PolyPhen Annotation benign
PolyPhen Variant Effect benign(ENST00000305988)
rSNP? Yes Link in rVarBase
Related Regulatory Elements n/a
Chromatin State Enhancers;Weak transcription
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 0)

SNPs in LD with rs4705059 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
CRHR1-IT1 Yes Adipose Subcutaneous cis GTEx