SNP Report
Basic Info
| Name | rs4345789 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 1:194351258 - 194351258(+) | ||
| Variant Seq | G | ||
| Ancestral Allele | A | ||
| Ref Seq | A | ||
| Minor Allele Frequence | 0.177316 | ||
| Annotation | intron_variant; non_coding_transcript_variant | ||
| Variant Effect | intron_variant(ENST00000435554); non_coding_transcript_variant(ENST00000435554) | ||
| SIFT Annotation | tolerated | ||
| SIFT Variant Effect | tolerated(LRG_507t1, ENST00000367435) | ||
| PolyPhen Annotation | possibly_damaging | ||
| PolyPhen Variant Effect | possibly_damaging(LRG_507t1, ENST00000367435) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | lncRNA | ||
| Chromatin State | Inactive region | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 0)
SNPs in LD with rs4345789 (count: 0)
SNP related eQTL (count: 1)