SNP Report
Basic Info
| Name |
rs4254099
dbSNP
Ensembl
|
| Location |
11:113506134 - 113506134(+) |
| Variant Seq |
T |
| Ancestral Allele |
C |
| Ref Seq |
C |
| Minor Allele Frequence |
0.048722 |
| Annotation |
upstream_gene_variant
|
| SIFT Annotation |
tolerated
|
| SIFT Variant Effect |
tolerated(ENST00000362072, ENST00000543292, ENST00000538967, ENST00000544518, ENST00000542968, ENST00000346454)
|
| PolyPhen Annotation |
benign
|
| PolyPhen Variant Effect |
benign(ENST00000362072, ENST00000543292, ENST00000538967, ENST00000544518, ENST00000542968, ENST00000346454)
|
| rSNP? |
Yes
Link in rVarBase
|
| Related Regulatory Elements |
n/a
|
| Chromatin State |
Enhancers;Weak transcription;Flanking Active TSS;Bivalent Enhancer
|
| No. of Marker's Association Results |
0 (Positive: 0; Negative: 0; Trend: 0) |
| Source |
LD-proxy |
SNP related association results
SNP related genes (count: 0)
SNPs in LD with rs4254099 (count: 0)
SNP related eQTL (count: 1)
