SNP Report
Basic Info
| Name | rs3917365 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 2:112828892 - 112828892(+) | ||
| Variant Seq | G | ||
| Ancestral Allele | G | ||
| Ref Seq | A | ||
| Minor Allele Frequence | 0.0988419 | ||
| Annotation | downstream_gene_variant | ||
| Variant Effect | downstream_gene_variant(ENST00000432018, ENST00000491056, ENST00000416750, ENST00000496280, ENST00000418817, ENST00000263341, ENST00000487639) | ||
| SIFT Annotation | tolerated | ||
| SIFT Variant Effect | tolerated(ENST00000263341) | ||
| PolyPhen Annotation | benign | ||
| PolyPhen Variant Effect | benign(ENST00000263341) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | Chromatin interactive region | ||
| Chromatin State | Weak transcription;Genic enhancers;Enhancers | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 1)
| Approved Symbol | Approved Name | Location | No. of Association Results (Positive/Negative/Trend)  |
|---|---|---|---|
| IL1B | interleukin 1 beta | 2q14 | 1(1/0/0) |
SNPs in LD with rs3917365 (count: 0)
SNP related eQTL (count: 1)