SNP Report
Name | rs17690326 dbSNP Ensembl | ||
---|---|---|---|
Location | 17:45843608 - 45843608(+) | ||
Variant Seq | C | ||
Ancestral Allele | C | ||
Ref Seq | T | ||
Minor Allele Frequence | 0.0860623 | ||
Annotation | downstream_gene_variant; upstream_gene_variant; intron_variant; non_coding_transcript_variant | ||
Variant Effect | downstream_gene_variant(ENST00000579244, ENST00000581125, ENST00000579599); upstream_gene_variant(ENST00000329196); intron_variant(ENST00000634876); non_coding_transcript_variant(ENST00000634876) | ||
SIFT Annotation | deleterious; tolerated | ||
SIFT Variant Effect | deleterious(ENST00000329196); tolerated(ENST00000329196) | ||
PolyPhen Annotation | probably_damaging | ||
PolyPhen Variant Effect | probably_damaging(ENST00000329196) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | lncRNA | ||
Chromatin State | Weak transcription;Enhancers | ||
No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
Source | LD-proxy |