SNP Report
Basic Info
| Name | rs16891521 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 8:42675289 - 42675289(+) | ||
| Variant Seq | G | ||
| Ancestral Allele | G | ||
| Ref Seq | A | ||
| Minor Allele Frequence | 0.0485224 | ||
| Annotation | upstream_gene_variant | ||
| SIFT Annotation | deleterious | ||
| SIFT Variant Effect | deleterious(ENST00000414154, ENST00000417410, ENST00000438528, ENST00000416469, ENST00000490331) | ||
| PolyPhen Annotation | benign | ||
| PolyPhen Variant Effect | benign(ENST00000414154, ENST00000417410, ENST00000438528, ENST00000416469, ENST00000490331) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | Chromatin interactive region | ||
| Chromatin State | Weak transcription | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 2)
| Approved Symbol | Approved Name | Location | No. of Association Results (Positive/Negative/Trend)  |
|---|---|---|---|
| SLC20A2 | solute carrier family 20 (phosphate transporter), member 2 | 8p11.21 | rSNP target |
| SMIM19 | small integral membrane protein 19 | 8p11.21 | rSNP target |
SNPs in LD with rs16891521 (count: 0)
SNP related eQTL (count: 1)