SNP Report
Basic Info
| Name | rs12806444 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 11:34484229 - 34484229(+) | ||
| Variant Seq | T | ||
| Ancestral Allele | C | ||
| Ref Seq | C | ||
| Minor Allele Frequence | 0.139976 | ||
| Annotation | downstream_gene_variant; intron_variant; non_coding_transcript_variant | ||
| Variant Effect | downstream_gene_variant(ENST00000579311); intron_variant(ENST00000257832, ENST00000620316, ENST00000528709, ENST00000429939, ENST00000312319); non_coding_transcript_variant(ENST00000528709) | ||
| SIFT Annotation | deleterious | ||
| SIFT Variant Effect | deleterious(ENST00000620316, ENST00000429939, ENST00000312319, ENST00000257832) | ||
| PolyPhen Annotation | benign; possibly_damaging | ||
| PolyPhen Variant Effect | benign(ENST00000620316); possibly_damaging(ENST00000429939, ENST00000312319, ENST00000257832) | ||
| rSNP? | No Link in rVarBase | ||
| Related Regulatory Elements | n/a | ||
| Chromatin State | Inactive region | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 1)
| Approved Symbol | Approved Name | Location | No. of Association Results (Positive/Negative/Trend)  |
|---|---|---|---|
| ELF5 | E74-like factor 5 (ets domain transcription factor) | 11p13-p12 | Mapped by Literature SNP, Mapped by LD-proxy |
SNPs in LD with rs12806444 (count: 0)
SNP related eQTL (count: 1)