SNP Report
Basic Info
| Name | rs10836228 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 11:34425094 - 34425094(+) | ||
| Variant Seq | G | ||
| Ancestral Allele | G | ||
| Ref Seq | T | ||
| Minor Allele Frequence | 0.169728 | ||
| Annotation | upstream_gene_variant | ||
| SIFT Annotation | tolerated | ||
| SIFT Variant Effect | tolerated(ENST00000435224) | ||
| PolyPhen Annotation | possibly_damaging | ||
| PolyPhen Variant Effect | possibly_damaging(ENST00000435224) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | Chromatin interactive region | ||
| Chromatin State | Weak transcription;Enhancers | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 1)
| Approved Symbol | Approved Name | Location | No. of Association Results (Positive/Negative/Trend)  |
|---|---|---|---|
| CIR1P3 | corepressor interacting with RBPJ, 1 pseudogene 3 | 11p13 | Mapped by Literature SNP, Mapped by LD-proxy, rSNP target |
SNPs in LD with rs10836228 (count: 0)
SNP related eQTL (count: 1)