PTSDgene database

SNP Report

Basic Info
Name rs10801153 dbSNP Ensembl
Location 1:192794818 - 192794818(+)
Variant Seq A
Ancestral Allele G
Ref Seq G
Minor Allele Frequence 0.29992
Annotation upstream_gene_variant
Variant Effect upstream_gene_variant(ENST00000454090)
SIFT Annotation tolerated
SIFT Variant Effect tolerated(ENST00000235382)
PolyPhen Annotation benign
PolyPhen Variant Effect benign(ENST00000235382)
rSNP? Yes Link in rVarBase
Related Regulatory Elements TF binding region
Chromatin State Enhancers;Weak transcription
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 0)

SNPs in LD with rs10801153 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
LURAP1 No Adipose Subcutaneous cis GTEx