PTSDgene database

SNP Report

Basic Info
Name rs10754636 dbSNP Ensembl
Location 1:238413033 - 238413033(+)
Variant Seq T
Ancestral Allele G
Ref Seq G
Minor Allele Frequence 0.136981
Annotation upstream_gene_variant
SIFT Annotation deleterious
SIFT Variant Effect deleterious(ENST00000611898, ENST00000366570)
PolyPhen Annotation unknown
PolyPhen Variant Effect unknown(ENST00000604646)
rSNP? No Link in rVarBase
Related Regulatory Elements n/a
Chromatin State Inactive region
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 0)

SNPs in LD with rs10754636 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
RP11-259G18.3 No Adipose Subcutaneous cis GTEx