SNP Report
Basic Info
| Name | rs10005259 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 4:34174285 - 34174285(+) | ||
| Variant Seq | A,C | ||
| Ancestral Allele | C | ||
| Ref Seq | G | ||
| Minor Allele Frequence | 0.258586 | ||
| Annotation | intron_variant; non_coding_transcript_variant | ||
| Variant Effect | intron_variant(ENST00000513843, ENST00000514877); non_coding_transcript_variant(ENST00000513843, ENST00000514877) | ||
| SIFT Annotation | deleterious; tolerated | ||
| SIFT Variant Effect | deleterious(ENST00000621961); tolerated(ENST00000511884) | ||
| PolyPhen Annotation | benign | ||
| PolyPhen Variant Effect | benign(ENST00000511884, ENST00000621961) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | n/a | ||
| Chromatin State | Weak transcription | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 0)
SNPs in LD with rs10005259 (count: 0)
SNP related eQTL (count: 1)